Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate ferredoxin oxidoreductase family protein | RPYSC3_RS16420 | Not Available | Negative | 3563257 - 3566742 | 127154.0 |
| hypothetical protein | RPYSC3_RS16425 | Not Available | Positive | 3567071 - 3567472 | 13650.7 |
| gcg_crpn prefix-to-repeats domain-containing protein | RPYSC3_RS16430 | Not Available | Positive | 3567701 - 3567988 | 9977.42 |
| duf1295 domain-containing protein | RPYSC3_RS16435 | Not Available | Negative | 3568052 - 3568861 | 30445.7 |
| hypothetical protein | RPYSC3_RS16440 | Not Available | Negative | 3568968 - 3569516 | 19968.0 |
| bifunctional protein-serine/threonine kinase/phosphatase | RPYSC3_RS16445 | Not Available | Negative | 3569604 - 3571337 | 63418.8 |
| formate/nitrite transporter family protein | RPYSC3_RS16450 | Not Available | Negative | 3571406 - 3572245 | 30118.7 |
| type ii toxin-antitoxin system rele/pare family toxin | RPYSC3_RS16455 | Not Available | Positive | 3572637 - 3572921 | 10496.7 |
| higa family addiction module antitoxin | RPYSC3_RS16460 | Not Available | Positive | 3572934 - 3573236 | 11309.7 |
| sdr family oxidoreductase | RPYSC3_RS16465 | Not Available | Negative | 3573420 - 3574277 | 30607.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
