Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | RPYSC3_RS16370 | Not Available | Positive | 3549811 - 3551829 | 71239.9 |
| grlr family regulatory protein | RPYSC3_RS16375 | Not Available | Positive | 3551993 - 3552343 | 12025.2 |
| pas domain s-box protein | RPYSC3_RS16380 | Not Available | Negative | 3552376 - 3555078 | 98693.2 |
| pqq-dependent dehydrogenase, methanol/ethanol family | RPYSC3_RS16385 | Not Available | Negative | 3555267 - 3557441 | 78076.1 |
| nudix hydrolase | RPYSC3_RS16390 | Not Available | Negative | 3557595 - 3558386 | 28295.8 |
| dihydrodipicolinate synthase family protein | RPYSC3_RS16395 | Not Available | Negative | 3558391 - 3559344 | 34555.8 |
| sdr family oxidoreductase | RPYSC3_RS16400 | Not Available | Negative | 3559447 - 3560325 | 30534.6 |
| maoc family dehydratase | RPYSC3_RS16405 | Not Available | Negative | 3560472 - 3561332 | 31469.5 |
| zn-ribbon domain-containing ob-fold protein | RPYSC3_RS16410 | Not Available | Negative | 3561463 - 3561855 | 14214.0 |
| thiolase domain-containing protein | RPYSC3_RS16415 | Not Available | Negative | 3561855 - 3563003 | 40305.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
