Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide pyrophosphatase/phosphodiesterase family protein | RPYSC3_RS16320 | Not Available | Positive | 3537029 - 3538879 | 64517.8 |
| hypothetical protein | RPYSC3_RS16325 | Not Available | Negative | 3538916 - 3539491 | 20174.0 |
| duf2177 family protein | RPYSC3_RS16330 | Not Available | Negative | 3539785 - 3540183 | 14735.3 |
| cryptochrome/photolyase family protein | RPYSC3_RS16335 | Not Available | Positive | 3540302 - 3541753 | 53299.1 |
| histone | RPYSC3_RS16340 | Not Available | Positive | 3541832 - 3542170 | 11764.1 |
| dmt family transporter | RPYSC3_RS16345 | Not Available | Negative | 3542271 - 3543146 | 30669.3 |
| phzf family phenazine biosynthesis protein | RPYSC3_RS16350 | Not Available | Positive | 3543299 - 3544207 | 31565.9 |
| hypothetical protein | RPYSC3_RS16355 | Not Available | Negative | 3544262 - 3544708 | 16861.6 |
| Trna-arg | Not Available | Not Available | Positive | 3544905 - 3544981 | Not Available |
| tetratricopeptide repeat protein | RPYSC3_RS16365 | Not Available | Positive | 3545201 - 3549259 | 147488.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
