Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | RPYSC3_RS16120 | Not Available | Positive | 3497409 - 3498155 | 27586.2 |
| gnat family n-acetyltransferase | RPYSC3_RS16125 | Not Available | Positive | 3498248 - 3499477 | 45430.6 |
| hit family protein | RPYSC3_RS16130 | Not Available | Positive | 3499527 - 3499955 | 15681.0 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | RPYSC3_RS16135 | Not Available | Negative | 3499961 - 3500422 | 16799.4 |
| azld domain-containing protein | RPYSC3_RS16140 | Not Available | Negative | 3500472 - 3500816 | 12010.1 |
| azlc family abc transporter permease | RPYSC3_RS16145 | Not Available | Negative | 3500813 - 3501556 | 26161.9 |
| pilz domain-containing protein | RPYSC3_RS16150 | Not Available | Positive | 3501709 - 3502068 | 13714.5 |
| lytic transglycosylase domain-containing protein | RPYSC3_RS16155 | Not Available | Negative | 3502083 - 3503114 | 36699.8 |
| glycosyltransferase family 39 protein | RPYSC3_RS16160 | Not Available | Positive | 3503501 - 3505600 | 71413.0 |
| atp-dependent clp protease atp-binding subunit clpa | RPYSC3_RS16165 | Not Available | Negative | 3505675 - 3508059 | 87538.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
