Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate 1-o-acyltransferase plsy | RPYSC3_RS16025 | Not Available | Positive | 3479043 - 3479654 | 21599.1 |
| hypothetical protein | RPYSC3_RS25005 | Not Available | Negative | 3479700 - 3479939 | 8679.23 |
| hypothetical protein | RPYSC3_RS16030 | Not Available | Positive | 3479996 - 3480253 | 9606.43 |
| is630 family transposase | RPYSC3_RS16035 | Not Available | Positive | 3480347 - 3481295 | 35542.1 |
| dna-processing protein dpra | RPYSC3_RS16040 | Not Available | Positive | 3481407 - 3482540 | 39301.4 |
| hypothetical protein | RPYSC3_RS16045 | Not Available | Negative | 3482795 - 3483010 | 7924.37 |
| type i dna topoisomerase | RPYSC3_RS16050 | Not Available | Positive | 3483257 - 3485992 | 99023.8 |
| ribonuclease r | RPYSC3_RS16055 | Not Available | Positive | 3485995 - 3488340 | 85622.0 |
| duf983 domain-containing protein | RPYSC3_RS16060 | Not Available | Positive | 3488340 - 3488768 | 15900.3 |
| nudix hydrolase | RPYSC3_RS16065 | Not Available | Positive | 3488838 - 3489593 | 27322.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
