Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| brna antitoxin family protein | RPYSC3_RS15975 | Not Available | Positive | 3469932 - 3470216 | 10545.7 |
| hypothetical protein | RPYSC3_RS15980 | Not Available | Negative | 3470220 - 3470426 | 7587.95 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | RPYSC3_RS15985 | Not Available | Negative | 3470438 - 3470725 | 10357.3 |
| nad(p)h-dependent flavin oxidoreductase | RPYSC3_RS15990 | Not Available | Negative | 3470815 - 3471891 | 37484.6 |
| holliday junction resolvase ruvx | RPYSC3_RS15995 | Not Available | Positive | 3472051 - 3472533 | 17044.7 |
| ychj family protein | RPYSC3_RS16000 | Not Available | Positive | 3472555 - 3472941 | 14679.0 |
| acyl-coa dehydrogenase family protein | RPYSC3_RS16005 | Not Available | Negative | 3473064 - 3474713 | 59849.0 |
| indolepyruvate/phenylpyruvate decarboxylase | RPYSC3_RS16010 | Not Available | Negative | 3474792 - 3476423 | 58162.0 |
| aspartate carbamoyltransferase catalytic subunit | RPYSC3_RS16015 | Not Available | Positive | 3476616 - 3477569 | 34422.9 |
| dihydroorotase | RPYSC3_RS16020 | Not Available | Positive | 3477589 - 3478899 | 46134.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
