Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase family protein | RPYSC3_RS01495 | Not Available | Positive | 311525 - 311872 | 12599.0 |
| duf86 domain-containing protein | RPYSC3_RS01500 | Not Available | Positive | 311862 - 312221 | 13561.0 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | RPYSC3_RS01505 | Not Available | Positive | 312344 - 313570 | 43921.4 |
| dna translocase ftsk | RPYSC3_RS01510 | Not Available | Positive | 313584 - 316058 | 89010.7 |
| outer membrane lipoprotein carrier protein lola | RPYSC3_RS01515 | Not Available | Positive | 316076 - 317020 | 34213.8 |
| class i sam-dependent dna methyltransferase | RPYSC3_RS01520 | Not Available | Positive | 317032 - 317628 | 21663.7 |
| exodeoxyribonuclease iii | RPYSC3_RS01525 | Not Available | Positive | 317681 - 318493 | 30975.3 |
| cyclic nucleotide-binding domain-containing protein | RPYSC3_RS01530 | Not Available | Negative | 318494 - 318943 | 16194.6 |
| response regulator transcription factor | RPYSC3_RS01535 | Not Available | Negative | 318983 - 319669 | 25115.1 |
| l,d-transpeptidase | RPYSC3_RS01540 | Not Available | Positive | 319834 - 320403 | 20987.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
