Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cvpa family protein | RPYSC3_RS15875 | Not Available | Positive | 3446792 - 3447427 | 23139.6 |
| amidophosphoribosyltransferase | RPYSC3_RS15880 | Not Available | Positive | 3447451 - 3448980 | 55187.7 |
| sdr family nad(p)-dependent oxidoreductase | RPYSC3_RS15885 | Not Available | Positive | 3449110 - 3449853 | 26131.6 |
| abc transporter substrate-binding protein | RPYSC3_RS15890 | Not Available | Positive | 3449936 - 3451162 | 42960.2 |
| tcr/tet family mfs transporter | RPYSC3_RS15895 | Not Available | Negative | 3451183 - 3452469 | 44569.0 |
| ribosome biogenesis gtpase der | RPYSC3_RS15900 | Not Available | Negative | 3452466 - 3453845 | 50623.6 |
| hypothetical protein | RPYSC3_RS15905 | Not Available | Negative | 3453918 - 3454463 | 18925.2 |
| tetratricopeptide repeat protein | RPYSC3_RS15910 | Not Available | Negative | 3454509 - 3455165 | 23681.0 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | RPYSC3_RS15915 | Not Available | Negative | 3455329 - 3456153 | 29254.6 |
| nnru family protein | RPYSC3_RS15920 | Not Available | Negative | 3456156 - 3456740 | 20733.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
