Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS15775 | Not Available | Positive | 3425634 - 3426827 | 40063.4 |
| guanylate kinase | RPYSC3_RS15780 | Not Available | Negative | 3426831 - 3427493 | 24534.1 |
| yicc/yloc family endoribonuclease | RPYSC3_RS15785 | Not Available | Negative | 3427496 - 3428383 | 32082.4 |
| endolytic transglycosylase mltg | RPYSC3_RS15790 | Not Available | Negative | 3428487 - 3429743 | 45247.2 |
| beta-ketoacyl-acp synthase ii | RPYSC3_RS15795 | Not Available | Negative | 3429945 - 3431210 | 43877.2 |
| acyl carrier protein | RPYSC3_RS15800 | Not Available | Negative | 3431307 - 3431546 | 8573.06 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | RPYSC3_RS15805 | Not Available | Negative | 3431850 - 3432587 | 25364.8 |
| acp s-malonyltransferase | RPYSC3_RS15810 | Not Available | Negative | 3432607 - 3433566 | 32255.8 |
| ggdef domain-containing protein | RPYSC3_RS15815 | Not Available | Positive | 3433832 - 3435181 | 48184.9 |
| 30s ribosomal protein s6 | RPYSC3_RS15820 | Not Available | Positive | 3435353 - 3435829 | 17949.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
