Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS15725 | Not Available | Negative | 3413650 - 3414189 | 19014.6 |
| dna polymerase iii subunit chi | RPYSC3_RS15730 | Not Available | Negative | 3414319 - 3414771 | 17091.9 |
| leucyl aminopeptidase | RPYSC3_RS15735 | Not Available | Negative | 3414780 - 3416282 | 52351.4 |
| lps export abc transporter permease lptf | RPYSC3_RS15740 | Not Available | Positive | 3416692 - 3417858 | 42777.8 |
| lps export abc transporter permease lptg | RPYSC3_RS15745 | Not Available | Positive | 3417872 - 3418957 | 39683.6 |
| lps-assembly protein lptd | RPYSC3_RS15750 | Not Available | Positive | 3418966 - 3421473 | 92005.2 |
| sura n-terminal domain-containing protein | RPYSC3_RS15755 | Not Available | Positive | 3421551 - 3422477 | 34248.4 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | RPYSC3_RS15760 | Not Available | Positive | 3422538 - 3423551 | 35144.6 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | RPYSC3_RS15765 | Not Available | Positive | 3423548 - 3424411 | 31267.0 |
| alcohol dehydrogenase | RPYSC3_RS15770 | Not Available | Positive | 3424428 - 3425486 | 37810.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
