Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase | RPYSC3_RS15625 | Not Available | Positive | 3389569 - 3391200 | 57563.9 |
| polysaccharide deacetylase family protein | RPYSC3_RS15630 | Not Available | Positive | 3391353 - 3392291 | 33288.2 |
| dihydrofolate reductase | RPYSC3_RS15635 | Not Available | Positive | 3392329 - 3392892 | 20168.8 |
| doxx family protein | RPYSC3_RS15640 | Not Available | Negative | 3392900 - 3393340 | 15080.8 |
| nadp-dependent malic enzyme | RPYSC3_RS15645 | Not Available | Negative | 3393445 - 3395754 | 82126.8 |
| aspartate--trna ligase | RPYSC3_RS15650 | Not Available | Negative | 3395800 - 3397575 | 66804.8 |
| protein adenylyltransferase selo | RPYSC3_RS15655 | Not Available | Positive | 3397835 - 3399313 | 53483.7 |
| ribonuclease d | RPYSC3_RS15660 | Not Available | Positive | 3399416 - 3400594 | 43903.4 |
| bestrophin family protein | RPYSC3_RS15665 | Not Available | Positive | 3400591 - 3401514 | 34107.6 |
| exopolyphosphatase | RPYSC3_RS15670 | Not Available | Negative | 3401537 - 3403042 | 54906.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
