Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglutaminylglutamine amidotransferase | RPYSC3_RS15510 | Not Available | Positive | 3367670 - 3369436 | 65587.2 |
| carboxylate-amine ligase | RPYSC3_RS15515 | Not Available | Positive | 3369429 - 3370658 | 45743.8 |
| efflux rnd transporter permease subunit | RPYSC3_RS15520 | Not Available | Negative | 3370693 - 3373929 | 116300.0 |
| efflux rnd transporter periplasmic adaptor subunit | RPYSC3_RS15525 | Not Available | Negative | 3374058 - 3375254 | 41932.3 |
| tetr/acrr family transcriptional regulator | RPYSC3_RS15530 | Not Available | Positive | 3375450 - 3376037 | 20890.8 |
| sensor domain-containing diguanylate cyclase | RPYSC3_RS15535 | Not Available | Positive | 3376170 - 3377336 | 41529.8 |
| aldo/keto reductase | RPYSC3_RS15540 | Not Available | Positive | 3377490 - 3378476 | 35514.4 |
| hypothetical protein | RPYSC3_RS15545 | Not Available | Negative | 3378497 - 3378913 | 14361.3 |
| cpbp family intramembrane glutamic endopeptidase | RPYSC3_RS15555 | Not Available | Positive | 3379421 - 3380068 | 23507.3 |
| potassium transporter kup | RPYSC3_RS15560 | Not Available | Negative | 3380078 - 3381940 | 67548.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
