Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lon peptidase substrate-binding domain-containing protein | RPYSC3_RS01445 | Not Available | Positive | 302366 - 303043 | 24827.9 |
| trm112 family protein | RPYSC3_RS01450 | Not Available | Positive | 303134 - 303331 | 7288.94 |
| dinb family protein | RPYSC3_RS01455 | Not Available | Negative | 303328 - 303861 | 19264.9 |
| ubiquinone biosynthesis hydroxylase | RPYSC3_RS01460 | Not Available | Negative | 303955 - 305316 | 48748.9 |
| acyl-coa thioesterase ii | RPYSC3_RS01465 | Not Available | Positive | 305414 - 306289 | 33286.9 |
| duf3800 domain-containing protein | RPYSC3_RS01470 | Not Available | Positive | 306392 - 307240 | 33088.9 |
| p-ii family nitrogen regulator | RPYSC3_RS01475 | Not Available | Positive | 307533 - 307871 | 12362.2 |
| ammonium transporter | RPYSC3_RS01480 | Not Available | Positive | 307947 - 309278 | 46207.9 |
| p-ii family nitrogen regulator | RPYSC3_RS01485 | Not Available | Positive | 309588 - 309926 | 12061.8 |
| ammonium transporter | RPYSC3_RS01490 | Not Available | Positive | 309964 - 311406 | 49792.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
