Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is481 family transposase | RPYSC3_RS15310 | Not Available | Positive | 3323204 - 3324373 | 44485.6 |
| duf4142 domain-containing protein | RPYSC3_RS15315 | Not Available | Negative | 3324424 - 3324987 | 19507.2 |
| trimeric intracellular cation channel family protein | RPYSC3_RS15320 | Not Available | Negative | 3325118 - 3325765 | 22105.7 |
| lysr family transcriptional regulator | RPYSC3_RS15325 | Not Available | Negative | 3325878 - 3326756 | 32537.9 |
| proton-conducting transporter membrane subunit | RPYSC3_RS15330 | Not Available | Positive | 3326867 - 3328438 | 53875.1 |
| ybcc family protein | RPYSC3_RS15335 | Not Available | Positive | 3328460 - 3330889 | 86613.1 |
| duf6671 family protein | RPYSC3_RS15340 | Not Available | Positive | 3330973 - 3331776 | 28016.0 |
| had family hydrolase | RPYSC3_RS15345 | Not Available | Positive | 3331837 - 3332574 | 25930.9 |
| lysr family transcriptional regulator | RPYSC3_RS15350 | Not Available | Negative | 3332602 - 3333534 | 34539.2 |
| form i ribulose bisphosphate carboxylase large subunit | RPYSC3_RS15355 | Not Available | Positive | 3333660 - 3335087 | 53599.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
