Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit d | RPYSC3_RS15105 | Not Available | Negative | 3275848 - 3277056 | 45125.5 |
| nadh-quinone oxidoreductase subunit c | RPYSC3_RS15110 | Not Available | Negative | 3277108 - 3277722 | 23140.6 |
| nuob/complex i 20 kda subunit family protein | RPYSC3_RS15115 | Not Available | Negative | 3277736 - 3278332 | 21800.5 |
| nadh-quinone oxidoreductase subunit a | RPYSC3_RS15120 | Not Available | Negative | 3278344 - 3278709 | 13528.7 |
| hypothetical protein | RPYSC3_RS15125 | Not Available | Positive | 3279021 - 3279215 | 6643.06 |
| Trna-asp | Not Available | Not Available | Positive | 3279695 - 3279771 | Not Available |
| hu family dna-binding protein | RPYSC3_RS15135 | Not Available | Positive | 3280024 - 3280335 | 11221.1 |
| peptidase t | RPYSC3_RS15140 | Not Available | Positive | 3280632 - 3281885 | 45522.1 |
| efflux rnd transporter periplasmic adaptor subunit | RPYSC3_RS15145 | Not Available | Positive | 3282029 - 3283273 | 43496.2 |
| efflux rnd transporter permease subunit | RPYSC3_RS15150 | Not Available | Positive | 3283302 - 3286442 | 110386.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
