Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| circadian clock protein kaic | RPYSC3_RS00050 | Not Available | Negative | 11247 - 12938 | 61929.8 |
| methyl-accepting chemotaxis protein | RPYSC3_RS00055 | Not Available | Negative | 13147 - 14226 | 38850.1 |
| lrp/asnc family transcriptional regulator | RPYSC3_RS00060 | Not Available | Negative | 14491 - 15000 | 18652.7 |
| hypothetical protein | RPYSC3_RS00065 | Not Available | Negative | 15140 - 15349 | 7389.68 |
| hypothetical protein | RPYSC3_RS00070 | Not Available | Negative | 15488 - 15736 | 9304.19 |
| cbb3-type cytochrome oxidase assembly protein ccos | RPYSC3_RS00075 | Not Available | Negative | 15738 - 15923 | 6441.91 |
| cation-translocating p-type atpase | RPYSC3_RS00080 | Not Available | Negative | 15914 - 18112 | 77870.8 |
| fixh family protein | RPYSC3_RS00085 | Not Available | Negative | 18147 - 18647 | 17978.7 |
| cytochrome c oxidase accessory protein ccog | RPYSC3_RS00090 | Not Available | Negative | 18667 - 20124 | 54570.6 |
| cytochrome-c oxidase, cbb3-type subunit iii | RPYSC3_RS00095 | Not Available | Negative | 20241 - 21122 | 31592.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
