Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(+)--rifampin adp-ribosyltransferase | RPYSC3_RS14860 | Not Available | Positive | 3219459 - 3219872 | 14990.7 |
| hypothetical protein | RPYSC3_RS14865 | Not Available | Negative | 3219924 - 3220253 | 11437.5 |
| gephyrin-like molybdotransferase glp | RPYSC3_RS14870 | Not Available | Positive | 3220453 - 3221664 | 42034.0 |
| transcriptional repressor lexa | RPYSC3_RS14875 | Not Available | Positive | 3221841 - 3222551 | 25897.4 |
| comec/rec2 family competence protein | RPYSC3_RS14880 | Not Available | Negative | 3222611 - 3224878 | 78899.7 |
| glutamine--trna ligase/yqey domain fusion protein | RPYSC3_RS14885 | Not Available | Negative | 3224971 - 3226653 | 63744.3 |
| glutamate--trna ligase | RPYSC3_RS14890 | Not Available | Positive | 3226815 - 3228236 | 52368.6 |
| citrate synthase | RPYSC3_RS14895 | Not Available | Positive | 3228387 - 3229691 | 48074.7 |
| lipid-a-disaccharide synthase | RPYSC3_RS14900 | Not Available | Negative | 3229775 - 3230989 | 43774.1 |
| lpxi family protein | RPYSC3_RS14905 | Not Available | Negative | 3230986 - 3231843 | 29834.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
