Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster insertion protein erpa | RPYSC3_RS14610 | Not Available | Positive | 3169680 - 3170012 | 11498.5 |
| cache domain-containing protein | RPYSC3_RS14615 | Not Available | Positive | 3170242 - 3171255 | 35827.6 |
| neurotransmitter-gated ion-channel ligand-binding protein | RPYSC3_RS14620 | Not Available | Positive | 3171252 - 3172316 | 39116.8 |
| hypothetical protein | RPYSC3_RS14625 | Not Available | Negative | 3172341 - 3173078 | 25541.4 |
| hypothetical protein | RPYSC3_RS14630 | Not Available | Negative | 3173200 - 3174159 | 33570.3 |
| helix-turn-helix domain-containing protein | RPYSC3_RS14635 | Not Available | Negative | 3174322 - 3174678 | 12928.8 |
| exodeoxyribonuclease iii | RPYSC3_RS14640 | Not Available | Positive | 3174841 - 3175632 | 29745.2 |
| tetratricopeptide repeat protein | RPYSC3_RS14645 | Not Available | Negative | 3175780 - 3176601 | 29668.1 |
| hypothetical protein | RPYSC3_RS14650 | Not Available | Negative | 3176588 - 3177031 | 15440.5 |
| dihydrolipoyl dehydrogenase | RPYSC3_RS14655 | Not Available | Negative | 3177263 - 3178684 | 50410.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
