Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eve domain-containing protein | RPYSC3_RS01345 | Not Available | Negative | 280509 - 280922 | 15306.5 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | RPYSC3_RS01350 | Not Available | Negative | 280925 - 281914 | 34000.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | RPYSC3_RS01355 | Not Available | Negative | 281951 - 283024 | 36783.4 |
| uroporphyrinogen-iii synthase | RPYSC3_RS01360 | Not Available | Positive | 283267 - 284013 | 26663.2 |
| cog4223 family protein | RPYSC3_RS01365 | Not Available | Positive | 284065 - 285474 | 47293.4 |
| heme biosynthesis protein hemy | RPYSC3_RS01370 | Not Available | Positive | 285483 - 287183 | 60365.1 |
| Trna-thr | Not Available | Not Available | Positive | 287341 - 287416 | Not Available |
| is481 family transposase | RPYSC3_RS01380 | Not Available | Negative | 287460 - 288644 | 45287.6 |
| hamp domain-containing protein | RPYSC3_RS01385 | Not Available | Negative | 289215 - 289997 | 27408.5 |
| b12-binding domain-containing protein | RPYSC3_RS01395 | Not Available | Positive | 290848 - 291630 | 28251.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
