Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen synthase | RPYSC3_RS14355 | Not Available | Positive | 3113054 - 3114106 | 38434.1 |
| rdd family protein | RPYSC3_RS14360 | Not Available | Positive | 3114267 - 3114794 | 19083.7 |
| arginyltransferase | RPYSC3_RS14365 | Not Available | Positive | 3114863 - 3115639 | 29382.1 |
| efflux rnd transporter periplasmic adaptor subunit | RPYSC3_RS14370 | Not Available | Negative | 3115732 - 3116508 | 27725.2 |
| duf1656 domain-containing protein | RPYSC3_RS14375 | Not Available | Negative | 3116631 - 3116846 | 7469.79 |
| fusc family protein | RPYSC3_RS14380 | Not Available | Negative | 3116836 - 3118959 | 76298.8 |
| arac family transcriptional regulator | RPYSC3_RS14385 | Not Available | Positive | 3119037 - 3119858 | 30092.2 |
| nramp family divalent metal transporter | RPYSC3_RS14390 | Not Available | Negative | 3119919 - 3121292 | 48318.1 |
| sodium:proton antiporter | RPYSC3_RS14400 | Not Available | Negative | 3121758 - 3123188 | 51121.9 |
| dna topoisomerase iv subunit a | RPYSC3_RS14405 | Not Available | Negative | 3123274 - 3125535 | 84077.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
