Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-phosphate kinase | RPYSC3_RS14255 | Not Available | Negative | 3098226 - 3099197 | 32889.3 |
| transcription antitermination factor nusb | RPYSC3_RS14260 | Not Available | Negative | 3099344 - 3099850 | 18875.6 |
| 6,7-dimethyl-8-ribityllumazine synthase | RPYSC3_RS14265 | Not Available | Negative | 3099856 - 3100347 | 17102.7 |
| riboflavin synthase | RPYSC3_RS14270 | Not Available | Negative | 3100484 - 3101092 | 21619.0 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | RPYSC3_RS14275 | Not Available | Negative | 3101103 - 3102272 | 40604.8 |
| transcriptional regulator nrdr | RPYSC3_RS14280 | Not Available | Negative | 3102269 - 3102751 | 18570.2 |
| serine hydroxymethyltransferase | RPYSC3_RS14285 | Not Available | Negative | 3102855 - 3104153 | 46211.4 |
| hypothetical protein | RPYSC3_RS14290 | Not Available | Positive | 3104485 - 3104772 | 10513.4 |
| type ii toxin-antitoxin system rele/pare family toxin | RPYSC3_RS14295 | Not Available | Positive | 3104769 - 3105050 | 10427.5 |
| hypothetical protein | RPYSC3_RS14300 | Not Available | Positive | 3105361 - 3105924 | 20853.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
