Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s9 | RPYSC3_RS14060 | Not Available | Negative | 3058849 - 3059331 | 17482.3 |
| 50s ribosomal protein l13 | RPYSC3_RS14065 | Not Available | Negative | 3059333 - 3059797 | 17174.2 |
| paai family thioesterase | RPYSC3_RS14070 | Not Available | Negative | 3059953 - 3060381 | 15221.6 |
| enoyl-coa hydratase | RPYSC3_RS14075 | Not Available | Positive | 3060471 - 3061298 | 29151.3 |
| coa-binding protein | RPYSC3_RS14080 | Not Available | Positive | 3061412 - 3061996 | 21116.7 |
| o-acetylhomoserine aminocarboxypropyltransferase | RPYSC3_RS14085 | Not Available | Positive | 3062090 - 3063370 | 45145.6 |
| tmem175 family protein | RPYSC3_RS14090 | Not Available | Positive | 3063410 - 3063985 | 21623.3 |
| zinc-binding dehydrogenase | RPYSC3_RS14095 | Not Available | Negative | 3064108 - 3065112 | 34457.8 |
| sdr family nad(p)-dependent oxidoreductase | RPYSC3_RS14100 | Not Available | Negative | 3065184 - 3065993 | 27363.8 |
| thiamine pyrophosphate-binding protein | RPYSC3_RS14105 | Not Available | Positive | 3066077 - 3067816 | 60196.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
