Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monovalent cation/h+ antiporter subunit d | RPYSC3_RS13960 | Not Available | Negative | 3032973 - 3034607 | 56940.1 |
| na+/h+ antiporter subunit c | RPYSC3_RS13965 | Not Available | Negative | 3034604 - 3034945 | 12000.0 |
| monovalent cation/h+ antiporter subunit a | RPYSC3_RS13970 | Not Available | Negative | 3034936 - 3037863 | 105274.0 |
| sam-dependent methyltransferase | RPYSC3_RS13975 | Not Available | Positive | 3038317 - 3039063 | 27119.3 |
| nad(p)h-dependent oxidoreductase | RPYSC3_RS13980 | Not Available | Negative | 3039093 - 3039617 | 19536.7 |
| trap transporter substrate-binding protein | RPYSC3_RS13985 | Not Available | Positive | 3040332 - 3041351 | 37344.7 |
| trap transporter large permease subunit | RPYSC3_RS13990 | Not Available | Positive | 3041364 - 3043247 | 65830.2 |
| acyl-coa synthetase | RPYSC3_RS13995 | Not Available | Positive | 3043302 - 3044951 | 59398.9 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | RPYSC3_RS14000 | Not Available | Negative | 3045184 - 3046914 | 63512.3 |
| mbl fold metallo-hydrolase | RPYSC3_RS14005 | Not Available | Negative | 3047267 - 3048070 | 29322.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
