Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ion transporter | RPYSC3_RS13810 | Not Available | Negative | 3006496 - 3007272 | 28684.3 |
| duf433 domain-containing protein | RPYSC3_RS13815 | Not Available | Positive | 3007411 - 3007638 | 8074.69 |
| duf5615 family pin-like protein | RPYSC3_RS13820 | Not Available | Positive | 3007635 - 3007985 | 12588.3 |
| hypothetical protein | RPYSC3_RS13825 | Not Available | Negative | 3007993 - 3008367 | 13868.7 |
| hypothetical protein | RPYSC3_RS13830 | Not Available | Negative | 3008576 - 3008791 | 8068.5 |
| duf4258 domain-containing protein | RPYSC3_RS13835 | Not Available | Negative | 3008788 - 3009111 | 12032.4 |
| excinuclease abc subunit uvra | RPYSC3_RS13840 | Not Available | Negative | 3009118 - 3012135 | 110789.0 |
| outer membrane protein | RPYSC3_RS13845 | Not Available | Negative | 3012447 - 3013202 | 26511.0 |
| single-stranded dna-binding protein | RPYSC3_RS13850 | Not Available | Positive | 3013730 - 3014236 | 17899.8 |
| hypothetical protein | RPYSC3_RS13855 | Not Available | Negative | 3014355 - 3014720 | 13605.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
