Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylisocitrate lyase | RPYSC3_RS13515 | Not Available | Positive | 2941706 - 2942623 | 32663.4 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | RPYSC3_RS13520 | Not Available | Positive | 2943105 - 2945471 | 86684.8 |
| alpha/beta fold hydrolase | RPYSC3_RS13525 | Not Available | Negative | 2946690 - 2947844 | 41276.7 |
| amidase | RPYSC3_RS13530 | Not Available | Positive | 2948161 - 2949576 | 49768.5 |
| crp/fnr family transcriptional regulator | RPYSC3_RS13535 | Not Available | Negative | 2949697 - 2950500 | 29590.8 |
| uxaa family hydrolase | RPYSC3_RS13540 | Not Available | Positive | 2950578 - 2952212 | 57640.8 |
| hypothetical protein | RPYSC3_RS13545 | Not Available | Negative | 2952747 - 2952974 | 8049.61 |
| brna antitoxin family protein | RPYSC3_RS13550 | Not Available | Positive | 2953419 - 2953664 | 8915.66 |
| dmt family transporter | RPYSC3_RS13555 | Not Available | Negative | 2953661 - 2954551 | 32110.3 |
| rida family protein | RPYSC3_RS13560 | Not Available | Positive | 2954740 - 2955141 | 14269.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
