Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | RPYSC3_RS13315 | Not Available | Negative | 2890774 - 2891970 | 41815.8 |
| trna dihydrouridine synthase dusb | RPYSC3_RS13320 | Not Available | Positive | 2892244 - 2893245 | 35654.9 |
| two-component system sensor histidine kinase ntrb | RPYSC3_RS13325 | Not Available | Positive | 2893242 - 2894414 | 42314.0 |
| nitrogen regulation protein nr(i) | RPYSC3_RS13330 | Not Available | Positive | 2894424 - 2895866 | 52885.0 |
| sensor histidine kinase ntry-like | RPYSC3_RS13335 | Not Available | Positive | 2896026 - 2898317 | 83792.4 |
| sigma-54-dependent transcriptional regulator | RPYSC3_RS13340 | Not Available | Positive | 2898334 - 2899701 | 50056.3 |
| d-amino-acid transaminase | RPYSC3_RS13345 | Not Available | Positive | 2899741 - 2900598 | 31212.6 |
| rna chaperone hfq | RPYSC3_RS13350 | Not Available | Positive | 2900779 - 2901027 | 9197.15 |
| gtpase hflx | RPYSC3_RS13355 | Not Available | Positive | 2901039 - 2902409 | 50307.1 |
| dna gyrase subunit a | RPYSC3_RS13360 | Not Available | Positive | 2902612 - 2905353 | 101014.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
