Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | RPYSC3_RS13170 | Not Available | Positive | 2856067 - 2857083 | 36640.5 |
| amino acid abc transporter permease | RPYSC3_RS13175 | Not Available | Positive | 2857104 - 2858309 | 43104.9 |
| amino acid abc transporter permease | RPYSC3_RS13180 | Not Available | Positive | 2858306 - 2859811 | 53945.2 |
| amino acid abc transporter atp-binding protein | RPYSC3_RS13185 | Not Available | Positive | 2859827 - 2860567 | 27532.5 |
| hypothetical protein | RPYSC3_RS13190 | Not Available | Negative | 2860589 - 2860858 | 9876.62 |
| cysteine synthase a | RPYSC3_RS13195 | Not Available | Negative | 2861004 - 2862041 | 36662.9 |
| sam-dependent methyltransferase | RPYSC3_RS13200 | Not Available | Negative | 2862150 - 2863379 | 47049.2 |
| duf1365 domain-containing protein | RPYSC3_RS13205 | Not Available | Negative | 2863439 - 2864284 | 30538.0 |
| nad(p)/fad-dependent oxidoreductase | RPYSC3_RS13210 | Not Available | Negative | 2864287 - 2865600 | 48653.8 |
| efflux transporter outer membrane subunit | RPYSC3_RS13215 | Not Available | Positive | 2866035 - 2867483 | 51710.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
