Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-2-macroglobulin family protein | RPYSC3_RS13120 | Not Available | Positive | 2841062 - 2846275 | 185015.0 |
| penicillin-binding protein 1c | RPYSC3_RS13125 | Not Available | Positive | 2846272 - 2848467 | 78476.4 |
| arnt family glycosyltransferase | RPYSC3_RS13130 | Not Available | Positive | 2848518 - 2850263 | 63641.6 |
| phosphatase pap2 family protein | RPYSC3_RS13135 | Not Available | Positive | 2850265 - 2851113 | 30387.0 |
| glycosyltransferase family 2 protein | RPYSC3_RS13140 | Not Available | Positive | 2851177 - 2851929 | 27343.9 |
| lipid-a-disaccharide synthase n-terminal domain-containing protein | RPYSC3_RS13145 | Not Available | Positive | 2851929 - 2852267 | 12644.8 |
| helix-turn-helix domain-containing protein | RPYSC3_RS13150 | Not Available | Positive | 2852489 - 2852764 | 11106.1 |
| is630 family transposase | RPYSC3_RS13155 | Not Available | Negative | 2852725 - 2853673 | 35542.1 |
| integrase core domain-containing protein | RPYSC3_RS13160 | Not Available | Positive | 2853753 - 2854517 | 29452.2 |
| cystathionine beta-lyase | RPYSC3_RS13165 | Not Available | Negative | 2854546 - 2855745 | 42392.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
