Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | RPYSC3_RS12970 | Not Available | Positive | 2811969 - 2813378 | 51190.7 |
| tyrosine-type recombinase/integrase | RPYSC3_RS12975 | Not Available | Negative | 2813467 - 2815071 | 60559.9 |
| Trna-glu | Not Available | Not Available | Positive | 2815140 - 2815214 | Not Available |
| pilz domain-containing protein | RPYSC3_RS12985 | Not Available | Positive | 2815552 - 2815809 | 9353.27 |
| voc family protein | RPYSC3_RS12990 | Not Available | Negative | 2816089 - 2816538 | 17088.5 |
| sir2 family nad-dependent protein deacylase | RPYSC3_RS12995 | Not Available | Positive | 2817021 - 2817782 | 27805.1 |
| cold-shock protein | RPYSC3_RS13000 | Not Available | Positive | 2817986 - 2818693 | 25481.4 |
| duf192 domain-containing protein | RPYSC3_RS13005 | Not Available | Positive | 2818932 - 2819360 | 15292.8 |
| Trna-pro | Not Available | Not Available | Positive | 2819441 - 2819517 | Not Available |
| glycosyltransferase family 4 protein | RPYSC3_RS13015 | Not Available | Positive | 2819617 - 2820735 | 40004.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
