Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase family protein | RPYSC3_RS01195 | Not Available | Positive | 253700 - 254218 | 17362.9 |
| ybfb/yjij family mfs transporter | RPYSC3_RS01200 | Not Available | Negative | 254361 - 255548 | 40162.9 |
| 3-isopropylmalate dehydrogenase | RPYSC3_RS01205 | Not Available | Positive | 255768 - 256880 | 39644.9 |
| hypothetical protein | RPYSC3_RS01210 | Not Available | Negative | 257044 - 257445 | 14469.3 |
| hypothetical protein | RPYSC3_RS01215 | Not Available | Negative | 257588 - 258397 | 27860.1 |
| aspartate-semialdehyde dehydrogenase | RPYSC3_RS01220 | Not Available | Positive | 258512 - 259546 | 37371.0 |
| tigr00645 family protein | RPYSC3_RS01225 | Not Available | Positive | 259706 - 260263 | 20584.3 |
| carbonic anhydrase | RPYSC3_RS01230 | Not Available | Negative | 260413 - 261057 | 23846.9 |
| hpch/hpai aldolase/citrate lyase family protein | RPYSC3_RS01235 | Not Available | Positive | 261239 - 262117 | 31335.9 |
| methyl-accepting chemotaxis protein | RPYSC3_RS01240 | Not Available | Negative | 262286 - 263977 | 58693.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
