Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS25290 | Not Available | Positive | 2801922 - 2802149 | 8334.99 |
| lpd7 domain-containing protein | RPYSC3_RS25295 | Not Available | Positive | 2802191 - 2803174 | 36201.2 |
| voc family protein | RPYSC3_RS12935 | Not Available | Negative | 2803881 - 2804279 | 15101.5 |
| cytochrome-c peroxidase | RPYSC3_RS25300 | Not Available | Negative | 2804264 - 2804839 | 20984.1 |
| hypothetical protein | RPYSC3_RS24990 | Not Available | Negative | 2805444 - 2805764 | 11856.6 |
| nhl repeat-containing protein | RPYSC3_RS12945 | Not Available | Negative | 2805830 - 2807824 | 72320.1 |
| c-type cytochrome | RPYSC3_RS12950 | Not Available | Positive | 2807879 - 2808301 | 15559.8 |
| zinc-dependent metalloprotease family protein | RPYSC3_RS12955 | Not Available | Positive | 2808312 - 2809535 | 44142.9 |
| hypothetical protein | RPYSC3_RS12960 | Not Available | Positive | 2810543 - 2811046 | 19146.2 |
| hypothetical protein | RPYSC3_RS12965 | Not Available | Negative | 2811178 - 2811423 | 9503.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
