Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase type ii | RPYSC3_RS12815 | Not Available | Positive | 2775644 - 2776372 | 26570.6 |
| single-stranded-dna-specific exonuclease recj | RPYSC3_RS12820 | Not Available | Positive | 2776485 - 2778326 | 65489.1 |
| hypothetical protein | RPYSC3_RS12825 | Not Available | Negative | 2778488 - 2778778 | 11030.1 |
| fusc family protein | RPYSC3_RS12830 | Not Available | Negative | 2778863 - 2779981 | 40865.3 |
| lytic murein transglycosylase | RPYSC3_RS12835 | Not Available | Negative | 2779999 - 2781228 | 45369.7 |
| lipid kinase | RPYSC3_RS12840 | Not Available | Positive | 2781507 - 2782445 | 32867.4 |
| elongation factor p | RPYSC3_RS12845 | Not Available | Negative | 2782513 - 2783079 | 20716.6 |
| ef-p lysine aminoacylase epma | RPYSC3_RS12850 | Not Available | Positive | 2783217 - 2784272 | 39077.0 |
| lysine-2,3-aminomutase-like protein | RPYSC3_RS12855 | Not Available | Positive | 2784269 - 2785360 | 39762.7 |
| hypothetical protein | RPYSC3_RS12860 | Not Available | Positive | 2785519 - 2785782 | 8717.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
