Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RPYSC3_RS12765 | Not Available | Positive | 2764358 - 2765440 | 39975.3 |
| abc transporter permease | RPYSC3_RS12770 | Not Available | Positive | 2765440 - 2766318 | 31825.4 |
| abc transporter substrate-binding protein | RPYSC3_RS12775 | Not Available | Positive | 2766374 - 2767351 | 34642.0 |
| amidase | RPYSC3_RS12780 | Not Available | Positive | 2767424 - 2768701 | 44218.0 |
| pha/phb synthase family protein | RPYSC3_RS12785 | Not Available | Negative | 2768743 - 2770548 | 66839.8 |
| hypothetical protein | RPYSC3_RS12790 | Not Available | Positive | 2770875 - 2771186 | 10135.0 |
| ll-diaminopimelate aminotransferase | RPYSC3_RS12795 | Not Available | Positive | 2771371 - 2772591 | 44390.5 |
| homoserine dehydrogenase | RPYSC3_RS12800 | Not Available | Positive | 2772670 - 2773995 | 46104.8 |
| class ii fructose-bisphosphatase | RPYSC3_RS12805 | Not Available | Positive | 2774058 - 2775062 | 35549.2 |
| gnat family n-acetyltransferase | RPYSC3_RS12810 | Not Available | Positive | 2775079 - 2775522 | 16559.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
