Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv subunit b | RPYSC3_RS12715 | Not Available | Negative | 2753404 - 2755455 | 74323.8 |
| deda family protein | RPYSC3_RS12720 | Not Available | Positive | 2755912 - 2756442 | 19299.7 |
| mbl fold metallo-hydrolase | RPYSC3_RS12725 | Not Available | Positive | 2756541 - 2757530 | 35298.1 |
| duf2087 domain-containing protein | RPYSC3_RS12730 | Not Available | Negative | 2757634 - 2758179 | 20815.2 |
| fmn-binding negative transcriptional regulator | RPYSC3_RS12735 | Not Available | Positive | 2758631 - 2759296 | 23416.0 |
| n-acetyl-gamma-glutamyl-phosphate reductase | RPYSC3_RS12740 | Not Available | Positive | 2759311 - 2760306 | 34561.5 |
| class i sam-dependent methyltransferase | RPYSC3_RS12745 | Not Available | Positive | 2760375 - 2760974 | 22029.9 |
| b12-binding domain-containing radical sam protein | RPYSC3_RS12750 | Not Available | Positive | 2761230 - 2763026 | 67479.5 |
| hypothetical protein | RPYSC3_RS12755 | Not Available | Positive | 2763269 - 2763631 | 12122.2 |
| gntr family transcriptional regulator | RPYSC3_RS12760 | Not Available | Negative | 2763644 - 2764342 | 26004.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
