Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | RPYSC3_RS12665 | Not Available | Negative | 2742712 - 2743746 | 37902.0 |
| dead/deah box helicase | RPYSC3_RS12670 | Not Available | Negative | 2743886 - 2745295 | 51232.8 |
| arac family transcriptional regulator | RPYSC3_RS12675 | Not Available | Negative | 2745568 - 2746590 | 38265.7 |
| methyl-accepting chemotaxis protein | RPYSC3_RS12680 | Not Available | Positive | 2746916 - 2748601 | 59826.9 |
| caspase domain-containing protein | RPYSC3_RS12685 | Not Available | Positive | 2748777 - 2750282 | 54642.6 |
| helix-turn-helix transcriptional regulator | RPYSC3_RS12690 | Not Available | Negative | 2750334 - 2751170 | 30657.8 |
| sdr family oxidoreductase | RPYSC3_RS12695 | Not Available | Positive | 2751269 - 2752174 | 31796.9 |
| hypothetical protein | RPYSC3_RS12700 | Not Available | Negative | 2752208 - 2752396 | 6829.61 |
| hypothetical protein | RPYSC3_RS12705 | Not Available | Negative | 2752454 - 2752930 | 16985.4 |
| higa family addiction module antitoxin | RPYSC3_RS25275 | Not Available | Positive | 2753194 - 2753391 | 7420.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
