Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase family protein | RPYSC3_RS01145 | Not Available | Negative | 243611 - 244099 | 17927.2 |
| succinate dehydrogenase iron-sulfur subunit | RPYSC3_RS01150 | Not Available | Negative | 244338 - 245120 | 29533.1 |
| succinate dehydrogenase flavoprotein subunit | RPYSC3_RS01155 | Not Available | Negative | 245235 - 247058 | 65958.2 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | RPYSC3_RS01160 | Not Available | Negative | 247062 - 247475 | 14677.7 |
| succinate dehydrogenase, cytochrome b556 subunit | RPYSC3_RS01165 | Not Available | Negative | 247472 - 247870 | 14849.4 |
| cation diffusion facilitator family transporter | RPYSC3_RS01170 | Not Available | Positive | 248247 - 249191 | 32815.7 |
| malonate--coa ligase | RPYSC3_RS01175 | Not Available | Negative | 249418 - 250929 | 54433.4 |
| fasciclin domain-containing protein | RPYSC3_RS01180 | Not Available | Positive | 251202 - 251777 | 19891.4 |
| cytochrome b/b6 domain-containing protein | RPYSC3_RS01185 | Not Available | Positive | 251990 - 252631 | 23397.3 |
| molybdopterin-dependent oxidoreductase | RPYSC3_RS01190 | Not Available | Positive | 252725 - 253504 | 28827.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
