Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antar domain-containing response regulator | RPYSC3_RS12225 | Not Available | Positive | 2644329 - 2644994 | 24325.7 |
| urea abc transporter substrate-binding protein | RPYSC3_RS12230 | Not Available | Positive | 2645006 - 2646244 | 45529.2 |
| abc transporter permease subunit | RPYSC3_RS12235 | Not Available | Positive | 2646360 - 2647232 | 30161.7 |
| branched-chain amino acid abc transporter permease | RPYSC3_RS12240 | Not Available | Positive | 2647244 - 2648308 | 37792.3 |
| abc transporter atp-binding protein | RPYSC3_RS12245 | Not Available | Positive | 2648308 - 2649030 | 26160.8 |
| abc transporter atp-binding protein | RPYSC3_RS12250 | Not Available | Positive | 2649023 - 2649736 | 25912.9 |
| acetamidase/formamidase family protein | RPYSC3_RS12255 | Not Available | Positive | 2649762 - 2650751 | 35766.0 |
| nitrilase-related carbon-nitrogen hydrolase | RPYSC3_RS12260 | Not Available | Positive | 2650766 - 2652505 | 62840.7 |
| sdr family nad(p)-dependent oxidoreductase | RPYSC3_RS12265 | Not Available | Positive | 2652521 - 2653282 | 25862.8 |
| abc transporter atp-binding protein | RPYSC3_RS12270 | Not Available | Negative | 2653587 - 2654447 | 30725.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
