Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron chelate uptake abc transporter family permease subunit | RPYSC3_RS12170 | Not Available | Negative | 2634240 - 2635190 | 33346.7 |
| abc transporter permease | RPYSC3_RS12175 | Not Available | Negative | 2635183 - 2636160 | 33914.6 |
| siderophore abc transporter substrate-binding protein | RPYSC3_RS12180 | Not Available | Negative | 2636157 - 2637062 | 32144.0 |
| rna polymerase sigma factor | RPYSC3_RS12190 | Not Available | Positive | 2637621 - 2638121 | 18667.6 |
| Trna-ser | Not Available | Not Available | Positive | 2638707 - 2638796 | Not Available |
| arac family transcriptional regulator | RPYSC3_RS12200 | Not Available | Positive | 2639097 - 2640101 | 36701.5 |
| nad(+)--dinitrogen-reductase adp-d-ribosyltransferase | RPYSC3_RS12205 | Not Available | Positive | 2640236 - 2641045 | 30208.2 |
| adp-ribosyl-[dinitrogen reductase] hydrolase | RPYSC3_RS12210 | Not Available | Positive | 2641057 - 2641947 | 31395.8 |
| grlr family regulatory protein | RPYSC3_RS12215 | Not Available | Negative | 2642444 - 2642779 | 12276.5 |
| transporter substrate-binding domain-containing protein | RPYSC3_RS12220 | Not Available | Positive | 2643175 - 2644332 | 41361.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
