Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-c crispr-associated protein cas5c | RPYSC3_RS12130 | Not Available | Negative | 2622634 - 2623329 | 25830.2 |
| crispr-associated helicase cas3' | RPYSC3_RS12135 | Not Available | Negative | 2623433 - 2625703 | 83157.7 |
| carboxymuconolactone decarboxylase family protein | RPYSC3_RS25260 | Not Available | Negative | 2625899 - 2626126 | 8216.91 |
| carboxymuconolactone decarboxylase family protein | RPYSC3_RS25265 | Not Available | Negative | 2626230 - 2626516 | 10631.6 |
| duf2218 domain-containing protein | RPYSC3_RS12140 | Not Available | Negative | 2626658 - 2626960 | 11266.2 |
| tonb-dependent receptor | RPYSC3_RS12145 | Not Available | Negative | 2627070 - 2629385 | 83037.6 |
| gnat family n-acetyltransferase | RPYSC3_RS12150 | Not Available | Negative | 2629536 - 2630021 | 18375.1 |
| tonb-dependent receptor | RPYSC3_RS12155 | Not Available | Negative | 2630046 - 2632211 | 77318.2 |
| fecr family protein | RPYSC3_RS12160 | Not Available | Negative | 2632376 - 2633365 | 35927.5 |
| abc transporter atp-binding protein | RPYSC3_RS12165 | Not Available | Negative | 2633485 - 2634243 | 27553.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
