Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | RPYSC3_RS12025 | Not Available | Negative | 2593632 - 2594609 | 35303.3 |
| abc transporter substrate-binding protein | RPYSC3_RS12030 | Not Available | Negative | 2594634 - 2596250 | 59940.1 |
| m20 aminoacylase family protein | RPYSC3_RS12035 | Not Available | Negative | 2596421 - 2597587 | 41327.2 |
| voc family protein | RPYSC3_RS12040 | Not Available | Negative | 2597616 - 2598398 | 27659.7 |
| pyridoxamine 5'-phosphate oxidase family protein | RPYSC3_RS12050 | Not Available | Positive | 2599172 - 2599846 | 25493.3 |
| plp-dependent aminotransferase family protein | RPYSC3_RS12055 | Not Available | Negative | 2599999 - 2601468 | 54611.9 |
| abc transporter substrate-binding protein | RPYSC3_RS12060 | Not Available | Positive | 2601724 - 2603292 | 58419.6 |
| carbohydrate abc transporter permease | RPYSC3_RS12065 | Not Available | Positive | 2603421 - 2604383 | 35657.7 |
| carbohydrate abc transporter permease | RPYSC3_RS12070 | Not Available | Positive | 2604383 - 2605243 | 30804.5 |
| abc transporter atp-binding protein | RPYSC3_RS12075 | Not Available | Positive | 2605240 - 2606343 | 39103.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
