Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | RPYSC3_RS11975 | Not Available | Positive | 2581730 - 2582599 | 31164.9 |
| nitrogenase component 1 | RPYSC3_RS11980 | Not Available | Positive | 2582665 - 2584173 | 55409.4 |
| nitrogenase component 1 | RPYSC3_RS11985 | Not Available | Positive | 2584185 - 2585567 | 50825.6 |
| nad(p)/fad-dependent oxidoreductase | RPYSC3_RS11990 | Not Available | Positive | 2585858 - 2587162 | 47067.5 |
| l-2-amino-thiazoline-4-carboxylic acid hydrolase | RPYSC3_RS11995 | Not Available | Negative | 2587200 - 2587685 | 17859.2 |
| cysteine hydrolase family protein | RPYSC3_RS12000 | Not Available | Negative | 2587682 - 2588389 | 25341.5 |
| abc transporter substrate-binding protein | RPYSC3_RS12005 | Not Available | Negative | 2588401 - 2590002 | 60316.7 |
| lysr substrate-binding domain-containing protein | RPYSC3_RS12010 | Not Available | Positive | 2590227 - 2591117 | 32966.1 |
| abc transporter atp-binding protein | RPYSC3_RS12015 | Not Available | Negative | 2591178 - 2592800 | 57567.2 |
| abc transporter permease | RPYSC3_RS12020 | Not Available | Negative | 2592797 - 2593627 | 29517.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
