Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsbe family thiol:disulfide interchange protein | RPYSC3_RS01095 | Not Available | Positive | 232826 - 233422 | 21363.9 |
| comea family dna-binding protein | RPYSC3_RS01100 | Not Available | Positive | 233562 - 233945 | 13244.3 |
| septation protein a | RPYSC3_RS01105 | Not Available | Negative | 234074 - 234676 | 22102.6 |
| signal recognition particle-docking protein ftsy | RPYSC3_RS01110 | Not Available | Negative | 234688 - 235635 | 33245.1 |
| rlua family pseudouridine synthase | RPYSC3_RS01115 | Not Available | Positive | 235664 - 236614 | 34161.0 |
| dna topoisomerase ib | RPYSC3_RS01120 | Not Available | Negative | 236624 - 237718 | 39749.1 |
| acetate--coa ligase | RPYSC3_RS01125 | Not Available | Positive | 238104 - 240056 | 72418.9 |
| l,d-transpeptidase | RPYSC3_RS01130 | Not Available | Positive | 240431 - 240955 | 18463.4 |
| ompa family protein | RPYSC3_RS01135 | Not Available | Negative | 241032 - 243080 | 70246.2 |
| hypothetical protein | RPYSC3_RS25220 | Not Available | Negative | 243350 - 243610 | 8643.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
