Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS11715 | Not Available | Negative | 2529315 - 2529653 | 12089.9 |
| hypothetical protein | RPYSC3_RS11720 | Not Available | Negative | 2529646 - 2529987 | 11332.8 |
| hypothetical protein | RPYSC3_RS11725 | Not Available | Negative | 2529974 - 2530285 | 10464.3 |
| hma2 domain-containing protein | RPYSC3_RS11730 | Not Available | Negative | 2530303 - 2530635 | 11924.4 |
| hypothetical protein | RPYSC3_RS11735 | Not Available | Negative | 2530643 - 2531065 | 15025.2 |
| iron response transcriptional regulator irra | RPYSC3_RS11740 | Not Available | Positive | 2531635 - 2532126 | 18301.8 |
| fad-dependent oxidoreductase | RPYSC3_RS11745 | Not Available | Negative | 2532252 - 2533625 | 49239.6 |
| dihydroxy-acid dehydratase | RPYSC3_RS11750 | Not Available | Negative | 2533680 - 2535458 | 62848.9 |
| mfs transporter | RPYSC3_RS11755 | Not Available | Negative | 2535424 - 2536734 | 47090.3 |
| gntr family transcriptional regulator | RPYSC3_RS11760 | Not Available | Positive | 2537051 - 2537728 | 25617.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
