Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | RPYSC3_RS11615 | Not Available | Positive | 2504434 - 2504874 | 15173.5 |
| cytochrome b/b6 domain-containing protein | RPYSC3_RS11620 | Not Available | Positive | 2504878 - 2505552 | 24227.9 |
| enoyl-coa hydratase | RPYSC3_RS11625 | Not Available | Negative | 2505582 - 2506367 | 27637.2 |
| coa-transferase subunit beta | RPYSC3_RS11630 | Not Available | Negative | 2506392 - 2507186 | 28219.6 |
| coa transferase subunit a | RPYSC3_RS11635 | Not Available | Negative | 2507183 - 2508178 | 36430.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | RPYSC3_RS11640 | Not Available | Negative | 2508270 - 2509262 | 34177.4 |
| tripartite tricarboxylate transporter permease | RPYSC3_RS11645 | Not Available | Negative | 2509339 - 2510841 | 52258.5 |
| tripartite tricarboxylate transporter tctb family protein | RPYSC3_RS11650 | Not Available | Negative | 2510841 - 2511317 | 16284.2 |
| lysr substrate-binding domain-containing protein | RPYSC3_RS11655 | Not Available | Positive | 2512120 - 2513013 | 32898.8 |
| 4-aminobutyrate--2-oxoglutarate transaminase | RPYSC3_RS11660 | Not Available | Positive | 2513181 - 2514455 | 44843.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
