Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | RPYSC3_RS11105 | Not Available | Negative | 2398713 - 2399465 | 26295.9 |
| gnat family n-acetyltransferase | RPYSC3_RS11110 | Not Available | Negative | 2399546 - 2400706 | 43739.0 |
| gnat family n-acetyltransferase | RPYSC3_RS11115 | Not Available | Negative | 2400962 - 2401471 | 18045.7 |
| peptidase | RPYSC3_RS11120 | Not Available | Negative | 2401490 - 2402236 | 27444.9 |
| transglutaminase domain-containing protein | RPYSC3_RS11125 | Not Available | Negative | 2402344 - 2403171 | 29575.9 |
| alpha-e domain-containing protein | RPYSC3_RS11130 | Not Available | Negative | 2403224 - 2404168 | 36085.6 |
| circularly permuted type 2 atp-grasp protein | RPYSC3_RS11135 | Not Available | Negative | 2404279 - 2405697 | 52736.2 |
| competence/damage-inducible protein a | RPYSC3_RS11140 | Not Available | Positive | 2405925 - 2406662 | 26526.1 |
| xanthine phosphoribosyltransferase | RPYSC3_RS11145 | Not Available | Positive | 2406822 - 2407343 | 18919.7 |
| hypothetical protein | RPYSC3_RS11150 | Not Available | Positive | 2407637 - 2408311 | 24677.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
