Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | RPYSC3_RS11050 | Not Available | Positive | 2388460 - 2388750 | 10831.0 |
| tir domain-containing protein | RPYSC3_RS11055 | Not Available | Negative | 2388804 - 2389622 | 29803.3 |
| chaperonin groel | RPYSC3_RS11060 | Not Available | Negative | 2390496 - 2392136 | 57855.0 |
| co-chaperone groes | RPYSC3_RS11065 | Not Available | Negative | 2392289 - 2392603 | 11122.6 |
| usg protein | RPYSC3_RS11070 | Not Available | Positive | 2393047 - 2393331 | 10915.1 |
| hypothetical protein | RPYSC3_RS11075 | Not Available | Negative | 2393337 - 2395022 | 61018.2 |
| nupc/nupg family nucleoside cnt transporter | RPYSC3_RS11080 | Not Available | Negative | 2395245 - 2396495 | 43051.4 |
| rubisco large subunit c-terminal-like domain-containing protein | RPYSC3_RS11090 | Not Available | Positive | 2396676 - 2397776 | 38565.8 |
| cupin domain-containing protein | RPYSC3_RS11095 | Not Available | Positive | 2397766 - 2398263 | 18315.5 |
| protease inhibitor i42 family protein | RPYSC3_RS11100 | Not Available | Negative | 2398270 - 2398689 | 15085.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
