Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanase | RPYSC3_RS10790 | Not Available | Positive | 2334768 - 2335256 | 18260.4 |
| duf2023 family protein | RPYSC3_RS10795 | Not Available | Negative | 2335528 - 2335944 | 15080.3 |
| flavodoxin flda | RPYSC3_RS10800 | Not Available | Negative | 2335923 - 2336405 | 17127.0 |
| heme abc transporter atp-binding protein | RPYSC3_RS10805 | Not Available | Negative | 2336604 - 2337410 | 28412.1 |
| feccd family abc transporter permease | RPYSC3_RS10810 | Not Available | Negative | 2337407 - 2338489 | 36646.4 |
| hemin abc transporter substrate-binding protein | RPYSC3_RS10815 | Not Available | Negative | 2338486 - 2339457 | 33398.3 |
| hemin uptake protein hemp | RPYSC3_RS10820 | Not Available | Negative | 2339454 - 2339657 | 7331.78 |
| heme anaerobic degradation radical sam methyltransferase chuw/hutw | RPYSC3_RS10825 | Not Available | Positive | 2339993 - 2341453 | 51646.6 |
| sdr family oxidoreductase | RPYSC3_RS10830 | Not Available | Positive | 2341441 - 2342112 | 22876.3 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | RPYSC3_RS10835 | Not Available | Positive | 2342331 - 2344670 | 82657.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
