Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine hydrolase family protein | RPYSC3_RS10595 | Not Available | Positive | 2291862 - 2292467 | 22838.7 |
| ferritin-like domain-containing protein | RPYSC3_RS10600 | Not Available | Positive | 2292551 - 2293042 | 18158.5 |
| zinc-dependent alcohol dehydrogenase | RPYSC3_RS10605 | Not Available | Negative | 2293200 - 2294372 | 42232.1 |
| hypothetical protein | RPYSC3_RS24955 | Not Available | Negative | 2294516 - 2294797 | 9951.82 |
| abc transporter substrate-binding protein | RPYSC3_RS10615 | Not Available | Positive | 2295225 - 2296157 | 33491.5 |
| uroporphyrinogen-iii c-methyltransferase | RPYSC3_RS10620 | Not Available | Negative | 2296193 - 2296942 | 25885.1 |
| cobyrinate a,c-diamide synthase | RPYSC3_RS10625 | Not Available | Negative | 2296942 - 2298303 | 47685.6 |
| precorrin-4 c(11)-methyltransferase | RPYSC3_RS10630 | Not Available | Negative | 2298290 - 2299069 | 27647.1 |
| cobalamin biosynthesis protein | RPYSC3_RS10635 | Not Available | Negative | 2299066 - 2299458 | 12948.6 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbie | RPYSC3_RS10640 | Not Available | Negative | 2299455 - 2300678 | 43040.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
