Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerc | RPYSC3_RS00945 | Not Available | Positive | 201477 - 202448 | 35106.7 |
| duf4337 domain-containing protein | RPYSC3_RS00950 | Not Available | Positive | 202589 - 203179 | 21073.2 |
| hypothetical protein | RPYSC3_RS00955 | Not Available | Negative | 203244 - 203786 | 20352.8 |
| dihydrolipoyl dehydrogenase | RPYSC3_RS00960 | Not Available | Negative | 203827 - 205230 | 48632.2 |
| sdr family oxidoreductase | RPYSC3_RS00965 | Not Available | Negative | 205262 - 206008 | 25448.5 |
| mapeg family protein | RPYSC3_RS00970 | Not Available | Negative | 206016 - 206417 | 14497.2 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | RPYSC3_RS00975 | Not Available | Negative | 206477 - 207721 | 43600.6 |
| 2-oxoglutarate dehydrogenase e1 component | RPYSC3_RS00980 | Not Available | Negative | 207826 - 210783 | 111303.0 |
| succinate--coa ligase subunit alpha | RPYSC3_RS00985 | Not Available | Negative | 210911 - 211795 | 30065.4 |
| adp-forming succinate--coa ligase subunit beta | RPYSC3_RS00990 | Not Available | Negative | 211860 - 213056 | 42272.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
