Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spy/cpxp family protein refolding chaperone | RPYSC3_RS10355 | Not Available | Positive | 2243058 - 2243657 | 22119.2 |
| Trna-lys | Not Available | Not Available | Positive | 2244001 - 2244076 | Not Available |
| orn/lys/arg decarboxylase n-terminal domain-containing protein | RPYSC3_RS10365 | Not Available | Positive | 2244472 - 2246829 | 88612.2 |
| gnat family n-acetyltransferase | RPYSC3_RS10370 | Not Available | Positive | 2246852 - 2247394 | 20108.2 |
| atp-binding protein | RPYSC3_RS10375 | Not Available | Negative | 2247434 - 2248801 | 49467.7 |
| response regulator transcription factor | RPYSC3_RS10380 | Not Available | Negative | 2248802 - 2249476 | 24434.8 |
| efflux rnd transporter periplasmic adaptor subunit | RPYSC3_RS10385 | Not Available | Positive | 2249750 - 2250877 | 40152.9 |
| efflux rnd transporter permease subunit | RPYSC3_RS10390 | Not Available | Positive | 2250905 - 2254126 | 115506.0 |
| efflux transporter outer membrane subunit | RPYSC3_RS10395 | Not Available | Positive | 2254126 - 2255610 | 52188.3 |
| hypothetical protein | RPYSC3_RS10400 | Not Available | Positive | 2255737 - 2256096 | 12648.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
